Dropped boat off at shop this week. Since the deck will be open I asked him to:
-Replace fuel lines - tanks were replaced already with aluminum
-Check/replace steering lines
-Front step up deck is soft so new deck going in up front - everything else is solid
-replace bilge pumps
- re-wired when I bought the boat
Am I missing anything? Stringers were re-done already - will check them

Here are some other possible items to check replace since you have the engine out and deck off and have easy access. Trying to replace these items with the motor and deck in place are probably impossible due to the cramped bilge of the inboard

Check / replace the shaft log hose
repack shaft / rudder
service / grease seacock
replace raw water hose
check / replace cutless bearing

Will add it to the list! Thanks!

Boat is in the shop - I will post a new thread on repairs/mods to give updates.

Deep sushi - thanks for the input - mechanic had some of those on his list and agreed that everything you mentioned should be done/checked. This is why I joined this forum.